Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upk1aQ9D132 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upk1aQ9D132 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk1aQ9D132 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Upk1aQ9D132 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.71□□□□□ -0.38
Upk1aQ9D132 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk1aQ9D132 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk1aQ9D132 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.71□□□□□ -0.38
Upk1aQ9D132 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Upk1aQ9D132 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Upk1aQ9D132 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.71□□□□□ -0.38
Upk1aQ9D132 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gm24543-201ENSMUST00000103867 82 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gm6912-201ENSMUST00000117218 544 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gm14822-201ENSMUST00000122247 291 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gm28630-201ENSMUST00000187806 498 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gm5779-201ENSMUST00000218467 910 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Chchd1-203ENSMUST00000224633 557 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.7□□□□□ -0.38
Upk1aQ9D132 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Upk1aQ9D132 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.69□□□□□ -0.38
Upk1aQ9D132 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gm24513-201ENSMUST00000174964 138 ntBASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gm27397-201ENSMUST00000184997 107 ntBASIC12.69□□□□□ -0.38
Upk1aQ9D132 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.69□□□□□ -0.38
Upk1aQ9D132 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Upk1aQ9D132 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Upk1aQ9D132 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms