Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Gm7862-201ENSMUST00000121461 292 ntBASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Tmem88Q9D0N8 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Gm27646-201ENSMUST00000183989 110 ntBASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Tmem88Q9D0N8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Tmem88Q9D0N8 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Tmem88Q9D0N8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Tmem88Q9D0N8 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms