Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Gm12928-201ENSMUST00000117115 573 ntBASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Gm2495-201ENSMUST00000191160 466 ntBASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Gm44397-201ENSMUST00000195950 113 ntBASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Gm17330-201ENSMUST00000221047 165 ntBASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Ssbp3Q9D032 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm4984-201ENSMUST00000115987 360 ntBASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm6244-201ENSMUST00000178732 841 ntBASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ssbp3Q9D032 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Gm14127-201ENSMUST00000117906 678 ntBASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Gm15824-201ENSMUST00000119516 955 ntBASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.17□□□□□ -0.62
Ssbp3Q9D032 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms