Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Mrpl55Q9CZ83 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Gm7336-201ENSMUST00000107041 1232 ntBASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Gm6415-201ENSMUST00000118488 348 ntBASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Ighv8-7-201ENSMUST00000194349 297 ntBASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 AC126408.1-201ENSMUST00000225184 523 ntBASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Mrpl55Q9CZ83 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 AC164565.1-201ENSMUST00000217520 1484 ntBASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Mrpl55Q9CZ83 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms