Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 Gm43052-201ENSMUST00000201451 1628 ntBASIC13.68□□□□□ -0.22
Retreg3Q9CQV4 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Gm26464-201ENSMUST00000157094 305 ntBASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Gm27772-201ENSMUST00000184900 187 ntBASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Gm37917-201ENSMUST00000194711 392 ntBASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retreg3Q9CQV4 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Gm5354-201ENSMUST00000182417 973 ntBASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retreg3Q9CQV4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retreg3Q9CQV4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms