Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Krt88Q9CPR6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.09□□□□□ -0.47
Krt88Q9CPR6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Krt88Q9CPR6 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.08□□□□□ -0.47
Krt88Q9CPR6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Krt88Q9CPR6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Krt88Q9CPR6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Krt88Q9CPR6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Krt88Q9CPR6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Gm15678-201ENSMUST00000117573 960 ntBASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Gm14494-201ENSMUST00000118786 435 ntBASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Krt88Q9CPR6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms