Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Gtf2a1Q99PM3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Gm10653-202ENSMUST00000139570 835 ntBASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Odf3b-204ENSMUST00000227834 930 ntBASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Gm45828-201ENSMUST00000206938 1836 ntBASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Gtf2a1Q99PM3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Gm44719-201ENSMUST00000206404 149 ntBASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Gtf2a1Q99PM3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms