Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh23Q99PF4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.3□□□□□ -0.28
Cdh23Q99PF4 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Gm23251-201ENSMUST00000103773 110 ntBASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Gm12502-201ENSMUST00000120197 444 ntBASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh23Q99PF4 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm11450-201ENSMUST00000121144 333 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm12058-201ENSMUST00000118614 437 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm24845-201ENSMUST00000158034 109 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Gm19640-201ENSMUST00000214849 464 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.29□□□□□ -0.28
Cdh23Q99PF4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.29□□□□□ -0.28
Cdh23Q99PF4 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.28□□□□□ -0.28
Cdh23Q99PF4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms