Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cstf3Q99LI7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Grk6-205ENSMUST00000224653 2976 ntBASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cstf3Q99LI7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cstf3Q99LI7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.95□□□□□ -0.34
Cstf3Q99LI7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cstf3Q99LI7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms