Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Usp11Q99K46 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.14□□□□□ -0.15
Usp11Q99K46 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gm7730-201ENSMUST00000212486 454 ntBASIC14.14□□□□□ -0.15
Usp11Q99K46 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Usp11Q99K46 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Usp11Q99K46 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp11Q99K46 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Usp11Q99K46 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp11Q99K46 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.13□□□□□ -0.15
Usp11Q99K46 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Usp11Q99K46 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Usp11Q99K46 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Gm21854-201ENSMUST00000179901 471 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Usp11Q99K46 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp11Q99K46 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Usp11Q99K46 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.13□□□□□ -0.15
Usp11Q99K46 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Usp11Q99K46 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.13□□□□□ -0.15
Usp11Q99K46 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Usp11Q99K46 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Usp11Q99K46 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.12□□□□□ -0.15
Usp11Q99K46 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.12□□□□□ -0.15
Usp11Q99K46 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp11Q99K46 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Usp11Q99K46 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.12□□□□□ -0.15
Usp11Q99K46 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Usp11Q99K46 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Usp11Q99K46 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.12□□□□□ -0.15
Usp11Q99K46 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms