Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdk9Q99J95 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.51□□□□□ -0.25
Cdk9Q99J95 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Gm13823-201ENSMUST00000119930 345 ntBASIC13.51□□□□□ -0.25
Cdk9Q99J95 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.51□□□□□ -0.25
Cdk9Q99J95 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.51□□□□□ -0.25
Cdk9Q99J95 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.51□□□□□ -0.25
Cdk9Q99J95 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.51□□□□□ -0.25
Cdk9Q99J95 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdk9Q99J95 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.5□□□□□ -0.25
Cdk9Q99J95 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Gm18027-201ENSMUST00000218947 619 ntBASIC13.5□□□□□ -0.25
Cdk9Q99J95 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cdk9Q99J95 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm2810-201ENSMUST00000118681 990 ntBASIC13.49□□□□□ -0.25
Cdk9Q99J95 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Gm38225-201ENSMUST00000194001 393 ntBASIC13.49□□□□□ -0.25
Cdk9Q99J95 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.49□□□□□ -0.25
Cdk9Q99J95 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdk9Q99J95 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms