Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhac2Q91Y09 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhac2Q91Y09 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhac2Q91Y09 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhac2Q91Y09 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.45□□□□□ -0.1
Pcdhac2Q91Y09 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms