Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhb13Q91Y06 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gm11524-201ENSMUST00000119349 807 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gm14057-201ENSMUST00000120631 482 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gm15376-201ENSMUST00000122258 783 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gm26464-201ENSMUST00000157094 305 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb13Q91Y06 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb13Q91Y06 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Gm42612-201ENSMUST00000197986 623 ntBASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Gm43170-201ENSMUST00000199827 612 ntBASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb13Q91Y06 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms