Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Gm12091-201ENSMUST00000146791 830 ntBASIC13.29□□□□□ -0.28
Usb1Q91W78 Gm23984-201ENSMUST00000157139 203 ntBASIC13.29□□□□□ -0.28
Usb1Q91W78 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Gm7653-201ENSMUST00000214567 508 ntBASIC13.29□□□□□ -0.28
Usb1Q91W78 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.29□□□□□ -0.28
Usb1Q91W78 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.29□□□□□ -0.28
Usb1Q91W78 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.29□□□□□ -0.28
Usb1Q91W78 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.29□□□□□ -0.28
Usb1Q91W78 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Usb1Q91W78 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Usb1Q91W78 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.28□□□□□ -0.28
Usb1Q91W78 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.28□□□□□ -0.28
Usb1Q91W78 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.28□□□□□ -0.28
Usb1Q91W78 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm24420-201ENSMUST00000176676 59 ntBASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usb1Q91W78 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.28□□□□□ -0.28
Usb1Q91W78 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Usb1Q91W78 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.27□□□□□ -0.28
Usb1Q91W78 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.27□□□□□ -0.28
Usb1Q91W78 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Usb1Q91W78 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usb1Q91W78 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usb1Q91W78 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usb1Q91W78 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.27□□□□□ -0.29
Usb1Q91W78 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usb1Q91W78 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms