Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.4■□□□□ 0.06
Ddx41Q91VN6 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.4■□□□□ 0.06
Ddx41Q91VN6 AC110817.1-201ENSMUST00000225706 605 ntBASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ddx41Q91VN6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.06
Ddx41Q91VN6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Gm4984-201ENSMUST00000115987 360 ntBASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Gm12928-201ENSMUST00000117115 573 ntBASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Ddx41Q91VN6 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gm9816-201ENSMUST00000122292 1414 ntBASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gm11425-201ENSMUST00000119608 498 ntBASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.38■□□□□ 0.05
Ddx41Q91VN6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.38■□□□□ 0.05
Ddx41Q91VN6 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms