Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm44608-201ENSMUST00000206827 855 ntBASIC12.96□□□□□ -0.33
Pcdh18Q8VHR0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.96□□□□□ -0.33
Pcdh18Q8VHR0 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.96□□□□□ -0.33
Pcdh18Q8VHR0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Pcdh18Q8VHR0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh18Q8VHR0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Pcdh18Q8VHR0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Pcdh18Q8VHR0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Pcdh18Q8VHR0 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Gm4995-201ENSMUST00000117247 432 ntBASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Gm13823-201ENSMUST00000119930 345 ntBASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Gm9824-201ENSMUST00000178707 561 ntBASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Mir6990-201ENSMUST00000183724 91 ntBASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Pcdh18Q8VHR0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Gm43125-201ENSMUST00000201724 730 ntBASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Pcdh18Q8VHR0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms