Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Gm27306-201ENSMUST00000183970 107 ntBASIC13.44□□□□□ -0.26
Vps39Q8R5L3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps39Q8R5L3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.43□□□□□ -0.26
Vps39Q8R5L3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Gm17330-201ENSMUST00000221047 165 ntBASIC13.43□□□□□ -0.26
Vps39Q8R5L3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps39Q8R5L3 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Mir6956-201ENSMUST00000183598 62 ntBASIC13.42□□□□□ -0.26
Vps39Q8R5L3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.42□□□□□ -0.26
Vps39Q8R5L3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms