Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdt1Q8R4E9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Gm45784-201ENSMUST00000188360 142 ntBASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 AC154171.1-201ENSMUST00000224610 643 ntBASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdt1Q8R4E9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Snora78-201ENSMUST00000158630 128 ntBASIC13□□□□□ -0.33
Cdt1Q8R4E9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Gm24420-201ENSMUST00000176676 59 ntBASIC13□□□□□ -0.33
Cdt1Q8R4E9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Gm37424-201ENSMUST00000191727 561 ntBASIC13□□□□□ -0.33
Cdt1Q8R4E9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13□□□□□ -0.33
Cdt1Q8R4E9 AC140451.2-201ENSMUST00000228030 664 ntBASIC13□□□□□ -0.33
Cdt1Q8R4E9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cdt1Q8R4E9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms