Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Nudcd3Q8R1N4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm15678-201ENSMUST00000117573 960 ntBASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm14494-201ENSMUST00000118786 435 ntBASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm10175-201ENSMUST00000086013 645 ntBASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nudcd3Q8R1N4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gm25287-201ENSMUST00000103846 110 ntBASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gm22918-201ENSMUST00000103855 110 ntBASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 H2af-ps-201ENSMUST00000119066 295 ntBASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gm27494-201ENSMUST00000184735 189 ntBASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gm21470-201ENSMUST00000187680 696 ntBASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gm29541-201ENSMUST00000191351 678 ntBASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Nudcd3Q8R1N4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm15460-201ENSMUST00000118147 391 ntBASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm12428-201ENSMUST00000119844 727 ntBASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm13365-201ENSMUST00000121188 973 ntBASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nudcd3Q8R1N4 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms