Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Gm6407-201ENSMUST00000176468 549 ntBASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Gm44999-201ENSMUST00000207456 1493 ntBASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col23a1Q8K4G2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gm13492-201ENSMUST00000119772 665 ntBASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 AC135469.1-201ENSMUST00000225984 772 ntBASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gm10312-201ENSMUST00000078515 489 ntBASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col23a1Q8K4G2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Mir6958-201ENSMUST00000184207 73 ntBASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Gm17812-201ENSMUST00000204935 318 ntBASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col23a1Q8K4G2 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm13045-201ENSMUST00000119019 712 ntBASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm13736-201ENSMUST00000119272 253 ntBASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm9540-201ENSMUST00000188230 478 ntBASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm38297-201ENSMUST00000195122 1057 ntBASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm7207-201ENSMUST00000211575 1067 ntBASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col23a1Q8K4G2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms