Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim5Q8CI51 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim5Q8CI51 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pdlim5Q8CI51 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Mir6956-201ENSMUST00000183598 62 ntBASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pdlim5Q8CI51 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gm27989-201ENSMUST00000184721 107 ntBASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gm17330-201ENSMUST00000221047 165 ntBASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pdlim5Q8CI51 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pdlim5Q8CI51 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Pdlim5Q8CI51 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
Pdlim5Q8CI51 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Gm15678-201ENSMUST00000117573 960 ntBASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Gm21854-201ENSMUST00000179901 471 ntBASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Gm44872-201ENSMUST00000207864 420 ntBASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Gm24447-201ENSMUST00000083977 338 ntBASIC12.33□□□□□ -0.44
Pdlim5Q8CI51 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms