Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rftn2Q8CHX7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Gm11978-201ENSMUST00000122315 466 ntBASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Rftn2Q8CHX7 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Mir874-201ENSMUST00000104769 76 ntBASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Gm13392-201ENSMUST00000117708 150 ntBASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Gm10478-201ENSMUST00000084451 396 ntBASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rftn2Q8CHX7 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rftn2Q8CHX7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms