Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Zc3h3Q8CHP0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm13408-201ENSMUST00000119822 798 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm12266-201ENSMUST00000120311 962 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm8908-201ENSMUST00000121633 1024 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm13935-201ENSMUST00000121859 798 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm17040-202ENSMUST00000170597 889 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Mir6958-201ENSMUST00000184207 73 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm45433-201ENSMUST00000209386 247 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm8913-201ENSMUST00000209491 641 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Gm8712-201ENSMUST00000221090 701 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 CT025551.1-201ENSMUST00000223996 692 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 AC113031.8-201ENSMUST00000227856 631 ntBASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Zc3h3Q8CHP0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Efs-202ENSMUST00000227037 2540 ntBASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Gm11667-201ENSMUST00000119828 486 ntBASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Gm13875-201ENSMUST00000120162 282 ntBASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Gm7003-201ENSMUST00000195089 312 ntBASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Gm6458-201ENSMUST00000211573 635 ntBASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Zc3h3Q8CHP0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms