Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.28■□□□□ 0.36
Rab11fip3Q8CHD8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Gm16379-201ENSMUST00000161469 348 ntBASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Gm27572-201ENSMUST00000183702 255 ntBASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Gm8762-201ENSMUST00000193486 339 ntBASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab11fip3Q8CHD8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab11fip3Q8CHD8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rab11fip3Q8CHD8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab11fip3Q8CHD8 Gm18244-201ENSMUST00000219747 1566 ntBASIC17.27■□□□□ 0.35
Rab11fip3Q8CHD8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab11fip3Q8CHD8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab11fip3Q8CHD8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Gm11978-201ENSMUST00000122315 466 ntBASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Gm4768-201ENSMUST00000206199 686 ntBASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Gm18054-201ENSMUST00000207539 555 ntBASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab11fip3Q8CHD8 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab11fip3Q8CHD8 Tmed9-203ENSMUST00000224741 1450 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms