Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm5161-201ENSMUST00000075243 853 ntBASIC16.58■□□□□ 0.24
Smc5Q8CG46 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.58■□□□□ 0.24
Smc5Q8CG46 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.58■□□□□ 0.24
Smc5Q8CG46 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smc5Q8CG46 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Gm8798-201ENSMUST00000211877 1661 ntBASIC16.57■□□□□ 0.24
Smc5Q8CG46 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.57■□□□□ 0.24
Smc5Q8CG46 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.57■□□□□ 0.24
Smc5Q8CG46 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Smc5Q8CG46 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm27430-201ENSMUST00000184585 107 ntBASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm44333-201ENSMUST00000197168 107 ntBASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm17795-201ENSMUST00000214505 757 ntBASIC16.56■□□□□ 0.24
Smc5Q8CG46 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.56■□□□□ 0.24
Smc5Q8CG46 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm20554-201ENSMUST00000177421 2352 ntBASIC16.56■□□□□ 0.24
Smc5Q8CG46 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smc5Q8CG46 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm13453-201ENSMUST00000118708 357 ntBASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm6161-201ENSMUST00000121942 1102 ntBASIC16.55■□□□□ 0.24
Smc5Q8CG46 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm6254-201ENSMUST00000168178 1072 ntBASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm6153-201ENSMUST00000172004 1058 ntBASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm5641-202ENSMUST00000198699 1080 ntBASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.55■□□□□ 0.24
Smc5Q8CG46 CT573086.1-201ENSMUST00000227202 1074 ntBASIC16.55■□□□□ 0.24
Smc5Q8CG46 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.55■□□□□ 0.24
Smc5Q8CG46 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms