Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.61■□□□□ 0.09
Vps53Q8CCB4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Mir497b-201ENSMUST00000093601 125 ntBASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Vps53Q8CCB4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Mir698-201ENSMUST00000102164 109 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Vps53Q8CCB4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Mir1894-201ENSMUST00000122802 81 ntBASIC15.59■□□□□ 0.09
Vps53Q8CCB4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Gm6244-201ENSMUST00000178732 841 ntBASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Vps53Q8CCB4 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.58■□□□□ 0.09
Vps53Q8CCB4 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.58■□□□□ 0.08
Vps53Q8CCB4 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.58■□□□□ 0.08
Vps53Q8CCB4 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Vps53Q8CCB4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms