Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rtp1Q8C8C1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Gm11637-201ENSMUST00000120601 592 ntBASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Gm26185-201ENSMUST00000157692 266 ntBASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Gm38317-201ENSMUST00000195564 343 ntBASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 AC126253.1-202ENSMUST00000226732 835 ntBASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Rtp1Q8C8C1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Gm4768-201ENSMUST00000206199 686 ntBASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtp1Q8C8C1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Rtp1Q8C8C1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtp1Q8C8C1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtp1Q8C8C1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.02
Rtp1Q8C8C1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtp1Q8C8C1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtp1Q8C8C1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Gm14208-201ENSMUST00000119645 678 ntBASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Gm15276-201ENSMUST00000145953 498 ntBASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Gm8738-201ENSMUST00000172606 329 ntBASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Gm25732-201ENSMUST00000175168 60 ntBASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Gm43378-201ENSMUST00000199336 582 ntBASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtp1Q8C8C1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms