Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm13123-201ENSMUST00000122173 492 ntBASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.56□□□□□ -0.24
Sh3rf2Q8BZT2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Gm18054-201ENSMUST00000207539 555 ntBASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.55□□□□□ -0.24
Sh3rf2Q8BZT2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Mir686-201ENSMUST00000102174 109 ntBASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Gm26927-201ENSMUST00000182385 965 ntBASIC13.54□□□□□ -0.24
Sh3rf2Q8BZT2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms