Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.03□□□□□ -0.64
Smco3Q8BQM7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Smco3Q8BQM7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Mir5126-201ENSMUST00000175513 77 ntBASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Smco3Q8BQM7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.01□□□□□ -0.65
Smco3Q8BQM7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Smco3Q8BQM7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11□□□□□ -0.65
Smco3Q8BQM7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms