Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Gm7902-201ENSMUST00000198842 947 ntBASIC11.06□□□□□ -0.64
Smg1Q8BKX6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smg1Q8BKX6 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Gm18730-201ENSMUST00000218038 343 ntBASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Gm32025-201ENSMUST00000217960 307 ntBASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Mir671-201ENSMUST00000102432 98 ntBASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Daam2-202ENSMUST00000224595 1926 ntBASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smg1Q8BKX6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Gm13600-201ENSMUST00000117949 744 ntBASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Gm3096-201ENSMUST00000185770 364 ntBASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smg1Q8BKX6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms