Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc40Q8BI79 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc40Q8BI79 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc40Q8BI79 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Ccdc40Q8BI79 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms