Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SynbQ8BI41 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SynbQ8BI41 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.83□□□□□ -0.36
SynbQ8BI41 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.83□□□□□ -0.36
SynbQ8BI41 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gm13392-201ENSMUST00000117708 150 ntBASIC12.83□□□□□ -0.36
SynbQ8BI41 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gm14660-201ENSMUST00000119809 575 ntBASIC12.83□□□□□ -0.36
SynbQ8BI41 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.83□□□□□ -0.36
SynbQ8BI41 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
SynbQ8BI41 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gm10478-201ENSMUST00000084451 396 ntBASIC12.83□□□□□ -0.36
SynbQ8BI41 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
SynbQ8BI41 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SynbQ8BI41 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SynbQ8BI41 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SynbQ8BI41 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SynbQ8BI41 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SynbQ8BI41 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.82□□□□□ -0.36
SynbQ8BI41 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm8062-201ENSMUST00000139696 444 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm17420-201ENSMUST00000164753 153 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SynbQ8BI41 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SynbQ8BI41 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm27847-201ENSMUST00000183711 107 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm27375-201ENSMUST00000183799 107 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm37424-201ENSMUST00000191727 561 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm7561-201ENSMUST00000211203 886 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm18041-201ENSMUST00000218210 618 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SynbQ8BI41 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SynbQ8BI41 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.81□□□□□ -0.36
SynbQ8BI41 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.81□□□□□ -0.36
SynbQ8BI41 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm24420-201ENSMUST00000176676 59 ntBASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm8652-201ENSMUST00000181363 964 ntBASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm27772-201ENSMUST00000184900 187 ntBASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm42693-201ENSMUST00000196779 631 ntBASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.81□□□□□ -0.36
SynbQ8BI41 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms