Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smndc1Q8BGT7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Mir449b-201ENSMUST00000104833 80 ntBASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Gm10253-201ENSMUST00000194270 940 ntBASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smndc1Q8BGT7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 AA543401-201ENSMUST00000164248 1269 ntBASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Gm27430-201ENSMUST00000184585 107 ntBASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Gm44333-201ENSMUST00000197168 107 ntBASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Smndc1Q8BGT7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Matn2-203ENSMUST00000226766 3252 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Gm15483-201ENSMUST00000120338 456 ntBASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smndc1Q8BGT7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms