Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdh19Q80TF3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Snora78-201ENSMUST00000158630 128 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm8810-201ENSMUST00000172895 754 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm27731-201ENSMUST00000185192 107 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm43818-201ENSMUST00000200605 466 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm8598-201ENSMUST00000221184 836 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdh19Q80TF3 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh19Q80TF3 Gm10156-201ENSMUST00000122364 462 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms