Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.65□□□□□ -0.06
Ush1gQ80T11 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm1335-201ENSMUST00000121653 386 ntBASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm42627-201ENSMUST00000197347 224 ntBASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.65□□□□□ -0.06
Ush1gQ80T11 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Ush1gQ80T11 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Ush1gQ80T11 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ush1gQ80T11 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm5687-201ENSMUST00000118252 640 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm4271-201ENSMUST00000174444 973 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm38002-201ENSMUST00000193255 180 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.64□□□□□ -0.07
Ush1gQ80T11 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ush1gQ80T11 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ush1gQ80T11 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.63□□□□□ -0.07
Ush1gQ80T11 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ush1gQ80T11 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ush1gQ80T11 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Ush1gQ80T11 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ush1gQ80T11 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ush1gQ80T11 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ush1gQ80T11 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ush1gQ80T11 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms