Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Prpf38bQ80SY5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Gm27341-201ENSMUST00000183570 106 ntBASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Gm37986-201ENSMUST00000193285 383 ntBASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.06□□□□□ -0.16
Prpf38bQ80SY5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gm12176-201ENSMUST00000121420 875 ntBASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Prpf38bQ80SY5 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm12882-201ENSMUST00000121696 517 ntBASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.04□□□□□ -0.16
Prpf38bQ80SY5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms