Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.41□□□□□ -0.42
Pif1Q80SX8 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.41□□□□□ -0.42
Pif1Q80SX8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.41□□□□□ -0.42
Pif1Q80SX8 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.41□□□□□ -0.42
Pif1Q80SX8 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pif1Q80SX8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.4□□□□□ -0.42
Pif1Q80SX8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Gm18054-201ENSMUST00000207539 555 ntBASIC12.4□□□□□ -0.42
Pif1Q80SX8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.4□□□□□ -0.42
Pif1Q80SX8 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.4□□□□□ -0.42
Pif1Q80SX8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.4□□□□□ -0.42
Pif1Q80SX8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.4□□□□□ -0.42
Pif1Q80SX8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pif1Q80SX8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pif1Q80SX8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pif1Q80SX8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm15770-201ENSMUST00000117498 584 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm12203-201ENSMUST00000118235 598 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm5687-201ENSMUST00000118252 640 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm12209-201ENSMUST00000120089 596 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm1335-201ENSMUST00000121653 386 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pif1Q80SX8 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.39□□□□□ -0.43
Pif1Q80SX8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms