Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CtifQ6PEE2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.27□□□□□ -0.13
CtifQ6PEE2 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.26□□□□□ -0.13
CtifQ6PEE2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.26□□□□□ -0.13
CtifQ6PEE2 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CtifQ6PEE2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm15991-202ENSMUST00000212123 3565 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm1401-201ENSMUST00000122048 772 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44357-201ENSMUST00000195897 142 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm19658-201ENSMUST00000196231 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44367-201ENSMUST00000196836 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44350-201ENSMUST00000197197 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44390-201ENSMUST00000197533 144 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44313-201ENSMUST00000198018 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44486-201ENSMUST00000198508 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44314-201ENSMUST00000199263 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44394-201ENSMUST00000199558 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44484-201ENSMUST00000199873 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44466-201ENSMUST00000200264 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm44359-201ENSMUST00000200671 138 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm45841-201ENSMUST00000207700 164 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Gm37849-201ENSMUST00000194722 1881 ntBASIC14.25□□□□□ -0.13
CtifQ6PEE2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
CtifQ6PEE2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms