Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc2Q6PDG5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc2Q6PDG5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc2Q6PDG5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc2Q6PDG5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Smarcc2Q6PDG5 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Smarcc2Q6PDG5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gm12138-201ENSMUST00000122180 951 ntBASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gm18307-201ENSMUST00000206864 949 ntBASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gm5161-201ENSMUST00000075243 853 ntBASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Smarcc2Q6PDG5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm11524-201ENSMUST00000119349 807 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm11918-201ENSMUST00000121660 179 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm15376-201ENSMUST00000122258 783 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm26464-201ENSMUST00000157094 305 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm19078-201ENSMUST00000206311 727 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms