Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.62□□□□□ -0.23
Sp140Q6NSQ5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gm26464-201ENSMUST00000157094 305 ntBASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gm24447-201ENSMUST00000083977 338 ntBASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.61□□□□□ -0.23
Sp140Q6NSQ5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm16215-201ENSMUST00000161990 637 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm29608-201ENSMUST00000190444 463 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm42612-201ENSMUST00000197986 623 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm43170-201ENSMUST00000199827 612 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm19078-201ENSMUST00000206311 727 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm7730-201ENSMUST00000212486 454 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gm5161-201ENSMUST00000075243 853 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sp140Q6NSQ5 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms