Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Krt39Q6IFX4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Gm12585-201ENSMUST00000117307 290 ntBASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Krt39Q6IFX4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.83□□□□□ -0.04
Krt39Q6IFX4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Gm15240-201ENSMUST00000118156 720 ntBASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Gm10576-201ENSMUST00000191927 825 ntBASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Gm6888-201ENSMUST00000221983 706 ntBASIC14.82□□□□□ -0.04
Krt39Q6IFX4 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Krt39Q6IFX4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Krt39Q6IFX4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.81□□□□□ -0.04
Krt39Q6IFX4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms