Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scube3Q66PY1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.15
Scube3Q66PY1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scube3Q66PY1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scube3Q66PY1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Gm11478-201ENSMUST00000117851 599 ntBASIC14.14□□□□□ -0.15
Scube3Q66PY1 Gm15806-201ENSMUST00000120696 955 ntBASIC14.14□□□□□ -0.15
Scube3Q66PY1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 AC125539.1-202ENSMUST00000226449 670 ntBASIC14.14□□□□□ -0.15
Scube3Q66PY1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.14□□□□□ -0.15
Scube3Q66PY1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scube3Q66PY1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Matn2-206ENSMUST00000228570 2798 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 Gm9002-201ENSMUST00000178437 499 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 Gm26315-201ENSMUST00000083890 321 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.13□□□□□ -0.15
Scube3Q66PY1 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Scube3Q66PY1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scube3Q66PY1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms