Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sdc3Q64519 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Sdc3Q64519 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Sdc3Q64519 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.92□□□□□ -0.34
Sdc3Q64519 Gm15806-201ENSMUST00000120696 955 ntBASIC12.92□□□□□ -0.34
Sdc3Q64519 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.92□□□□□ -0.34
Sdc3Q64519 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.92□□□□□ -0.34
Sdc3Q64519 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Sdc3Q64519 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sdc3Q64519 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sdc3Q64519 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.91□□□□□ -0.34
Sdc3Q64519 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm5035-201ENSMUST00000215581 927 ntBASIC12.91□□□□□ -0.34
Sdc3Q64519 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm5356-201ENSMUST00000093326 615 ntBASIC12.91□□□□□ -0.34
Sdc3Q64519 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sdc3Q64519 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Sdc3Q64519 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.9□□□□□ -0.34
Sdc3Q64519 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.9□□□□□ -0.34
Sdc3Q64519 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.9□□□□□ -0.34
Sdc3Q64519 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.9□□□□□ -0.34
Sdc3Q64519 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.9□□□□□ -0.34
Sdc3Q64519 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.9□□□□□ -0.34
Sdc3Q64519 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sdc3Q64519 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.9□□□□□ -0.34
Sdc3Q64519 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.9□□□□□ -0.34
Sdc3Q64519 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.9□□□□□ -0.34
Sdc3Q64519 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.9□□□□□ -0.34
Sdc3Q64519 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Sdc3Q64519 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sdc3Q64519 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sdc3Q64519 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms