Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.27□□□□□ -0.45
VcanQ62059 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
VcanQ62059 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
VcanQ62059 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.27□□□□□ -0.45
VcanQ62059 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.27□□□□□ -0.45
VcanQ62059 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 Mir181d-201ENSMUST00000102383 72 ntBASIC12.27□□□□□ -0.45
VcanQ62059 Gm15432-201ENSMUST00000121106 195 ntBASIC12.27□□□□□ -0.45
VcanQ62059 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.27□□□□□ -0.45
VcanQ62059 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.27□□□□□ -0.45
VcanQ62059 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
VcanQ62059 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.26□□□□□ -0.45
VcanQ62059 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.26□□□□□ -0.45
VcanQ62059 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
VcanQ62059 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.26□□□□□ -0.45
VcanQ62059 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
VcanQ62059 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.26□□□□□ -0.45
VcanQ62059 Gm28693-202ENSMUST00000190758 331 ntBASIC12.26□□□□□ -0.45
VcanQ62059 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.26□□□□□ -0.45
VcanQ62059 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.26□□□□□ -0.45
VcanQ62059 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
VcanQ62059 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.26□□□□□ -0.45
VcanQ62059 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.26□□□□□ -0.45
VcanQ62059 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.26□□□□□ -0.45
VcanQ62059 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.26□□□□□ -0.45
VcanQ62059 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.26□□□□□ -0.45
VcanQ62059 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
VcanQ62059 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
VcanQ62059 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
VcanQ62059 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
VcanQ62059 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.25□□□□□ -0.45
VcanQ62059 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.25□□□□□ -0.45
VcanQ62059 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VcanQ62059 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.25□□□□□ -0.45
VcanQ62059 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.25□□□□□ -0.45
VcanQ62059 Gm12015-201ENSMUST00000117065 843 ntBASIC12.25□□□□□ -0.45
VcanQ62059 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.25□□□□□ -0.45
VcanQ62059 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.25□□□□□ -0.45
VcanQ62059 Gm5621-201ENSMUST00000187303 640 ntBASIC12.25□□□□□ -0.45
VcanQ62059 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.25□□□□□ -0.45
VcanQ62059 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
VcanQ62059 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.25□□□□□ -0.45
VcanQ62059 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
VcanQ62059 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
VcanQ62059 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.24□□□□□ -0.45
VcanQ62059 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VcanQ62059 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
VcanQ62059 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.24□□□□□ -0.45
VcanQ62059 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
VcanQ62059 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VcanQ62059 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
VcanQ62059 Snora73b-201ENSMUST00000083419 205 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms