Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Foxc1Q61572 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Foxc1Q61572 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Foxc1Q61572 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Foxc1Q61572 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.8
Foxc1Q61572 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Foxc1Q61572 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Foxc1Q61572 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Foxc1Q61572 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Foxc1Q61572 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.02□□□□□ -0.8
Foxc1Q61572 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm4875-201ENSMUST00000118257 786 ntBASIC10.02□□□□□ -0.81
Foxc1Q61572 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.02□□□□□ -0.81
Foxc1Q61572 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.02□□□□□ -0.81
Foxc1Q61572 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Foxc1Q61572 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 AC153872.1-201ENSMUST00000199539 128 ntBASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm43703-201ENSMUST00000200523 763 ntBASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC10.02□□□□□ -0.81
Foxc1Q61572 CT030194.1-201ENSMUST00000225507 532 ntBASIC10.02□□□□□ -0.81
Foxc1Q61572 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Gm20445-201ENSMUST00000061905 565 ntBASIC10.02□□□□□ -0.81
Foxc1Q61572 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Foxc1Q61572 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Foxc1Q61572 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Foxc1Q61572 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm11491-201ENSMUST00000129441 1118 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm4804-201ENSMUST00000182234 999 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm43787-201ENSMUST00000197792 1037 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm44552-201ENSMUST00000205458 1247 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm18027-201ENSMUST00000218947 619 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC10.01□□□□□ -0.81
Foxc1Q61572 AC165260.4-201ENSMUST00000225924 724 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Foxc1Q61572 AC154730.1-201ENSMUST00000227874 816 ntBASIC10.01□□□□□ -0.81
Foxc1Q61572 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Foxc1Q61572 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Foxc1Q61572 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms