Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.95□□□□□ -0.18
Smarcd1Q61466 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarcd1Q61466 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.94□□□□□ -0.18
Smarcd1Q61466 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.94□□□□□ -0.18
Smarcd1Q61466 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Gm22331-201ENSMUST00000158066 136 ntBASIC13.94□□□□□ -0.18
Smarcd1Q61466 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.94□□□□□ -0.18
Smarcd1Q61466 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.94□□□□□ -0.18
Smarcd1Q61466 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.94□□□□□ -0.18
Smarcd1Q61466 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcd1Q61466 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm16202-201ENSMUST00000117532 544 ntBASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm11618-201ENSMUST00000117946 267 ntBASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm12203-201ENSMUST00000118235 598 ntBASIC13.93□□□□□ -0.18
Smarcd1Q61466 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm12209-201ENSMUST00000120089 596 ntBASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm29127-201ENSMUST00000188304 517 ntBASIC13.93□□□□□ -0.18
Smarcd1Q61466 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.93□□□□□ -0.18
Smarcd1Q61466 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.93□□□□□ -0.18
Smarcd1Q61466 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcd1Q61466 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smarcd1Q61466 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms