Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a1Q61245 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col11a1Q61245 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.67□□□□□ -0.06
Col11a1Q61245 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.67□□□□□ -0.06
Col11a1Q61245 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.67□□□□□ -0.06
Col11a1Q61245 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col11a1Q61245 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a1Q61245 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.66□□□□□ -0.06
Col11a1Q61245 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.66□□□□□ -0.06
Col11a1Q61245 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Gm10179-201ENSMUST00000086233 688 ntBASIC14.66□□□□□ -0.06
Col11a1Q61245 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col11a1Q61245 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.66□□□□□ -0.06
Col11a1Q61245 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a1Q61245 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col11a1Q61245 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col11a1Q61245 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col11a1Q61245 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.65□□□□□ -0.06
Col11a1Q61245 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col11a1Q61245 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms