Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn2bQ56A07 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Scn2bQ56A07 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn2bQ56A07 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn2bQ56A07 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn2bQ56A07 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scn2bQ56A07 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scn2bQ56A07 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Scn2bQ56A07 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Gm15678-201ENSMUST00000117573 960 ntBASIC13.27□□□□□ -0.29
Scn2bQ56A07 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.27□□□□□ -0.29
Scn2bQ56A07 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.27□□□□□ -0.29
Scn2bQ56A07 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.27□□□□□ -0.29
Scn2bQ56A07 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.27□□□□□ -0.29
Scn2bQ56A07 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scn2bQ56A07 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gm4804-201ENSMUST00000182234 999 ntBASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gm27838-201ENSMUST00000184829 128 ntBASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mir6977-201ENSMUST00000184960 64 ntBASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scn2bQ56A07 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.26□□□□□ -0.29
Scn2bQ56A07 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.25□□□□□ -0.29
Scn2bQ56A07 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Scn2bQ56A07 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms