Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Gm8805-201ENSMUST00000117848 313 ntBASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Mir1938-201ENSMUST00000158746 100 ntBASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Gm42693-201ENSMUST00000196779 631 ntBASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rc3h1Q4VGL6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Gm10478-201ENSMUST00000084451 396 ntBASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rc3h1Q4VGL6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rc3h1Q4VGL6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.46■□□□□ 0.06
Rc3h1Q4VGL6 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rc3h1Q4VGL6 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rc3h1Q4VGL6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rc3h1Q4VGL6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Gm17420-201ENSMUST00000164753 153 ntBASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Gm6007-201ENSMUST00000208170 823 ntBASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rc3h1Q4VGL6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rc3h1Q4VGL6 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms