Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Gm10268-201ENSMUST00000085340 555 ntBASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Gm12626-201ENSMUST00000117339 1983 ntBASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.62■□□□□ 0.09
Prpf38aQ4FK66 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Prpf38aQ4FK66 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Gm8805-201ENSMUST00000117848 313 ntBASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Gm6007-201ENSMUST00000208170 823 ntBASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Prpf38aQ4FK66 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Gm7029-201ENSMUST00000173226 450 ntBASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Prpf38aQ4FK66 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms